# Colocalization

A "*credible set*" is the set of variant(s) at a locus that is most statistically likely to contain the causal variant by [finemapping](/background-reading/finemapping.md) methods.

What colocalization does is to ask if association signals overlap not just at one SNP but for the whole credible set that was finemapped. If the credible set of an eQTL for a gene overlaps well the credible set of a genetic association, that can be one clue to the underlying gene which could be associated with the trait that you are studying.

<figure><img src="/files/lvmbDNI6qnMxAAqoEi7O" alt=""><figcaption></figcaption></figure>

[Click here to read more about how colocalization is done in FinnGen](/finngen-data-specifics/green-library-data-aggregate-data/other-analyses-available/colocalizations.md) and [click here to read more about the file format of the FInnGen colocalization results](/finngen-data-specifics/green-library-data-aggregate-data/core-analysis-results-files/colocalization-results-format.md).


---

# Agent Instructions: Querying This Documentation

If you need additional information that is not directly available in this page, you can query the documentation dynamically by asking a question.

Perform an HTTP GET request on the current page URL with the `ask` query parameter:

```
GET https://docs.finngen.fi/background-reading/colocalization.md?ask=<question>
```

The question should be specific, self-contained, and written in natural language.
The response will contain a direct answer to the question and relevant excerpts and sources from the documentation.

Use this mechanism when the answer is not explicitly present in the current page, you need clarification or additional context, or you want to retrieve related documentation sections.
