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FinnGen Handbook
  • Introduction
  • Where to begin
  • Background Concepts
  • FinnGen Data Specifics
  • Disease Specific Task Forces
  • Working in the Sandbox
  • Working outside the Sandbox
  • FAQ
    • FinnGen Spin Offs
    • FinnGen access and accounts
    • FinnGen data
    • Where can I find
    • PheWeb
    • Registries
    • Sandbox
    • Risteys
    • Endpoints
      • Where do I find the most recent list of FinnGen endpoints?
      • What does it mean when an endpoint has “mode” at the end?
      • What scenario would cause an NA (missing data) entry rather than a zero?
      • Does it mean anything when a value is written as $!$ instead of NA?
      • Why is there an inconsistency between ICD10 code J84.1 (IPF) and J84.112?
      • How are control endpoints calculated?
      • Can I get a list of FinnGen IDs by control group for my endpoint?
      • What does Level C mean in the endpoints data table?
      • What does the SUBSET_COV field show?
      • Why is there a "K." prefix on some endpoints?
      • Why there are fewer endpoints going from R5 (N = 2,925) to R8 (N = 2,202)?
      • Should I include primary care registry (PRIM_OUT) codes in my cohort definitions?
      • I found BL_AGE after FU_END_AGE in the endpoint data, how is it possible?
      • Why do individuals who are not dead have death age in endpoint data?
      • I found EVENT_AGE after FU_END_AGE in endpoint data, how is it possible?
    • Pipelines
    • Citing
    • For biobanks
    • Data Security and Protection
  • Release Notes
  • Tool Catalog
  • Glossary
  • User Support
  • Data Protection & Security
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  1. FAQ

Endpoints

Questions related to FinnGen's endpoints and health outcomes available.

Where do I find the most recent list of FinnGen endpoints?

What does it mean when an endpoint has “mode” at the end?

What scenario would cause an NA (missing data) entry rather than a zero?

Does it mean anything when a value is written as $!$ instead of NA?

Why is there an inconsistency between ICD10 code J84.1 (IPF) and J84.112?

How are control endpoints calculated?

Can I get a list of FinnGen IDs by control group for my endpoint?

What does Level C mean in the endpoints data table?

What does the SUBSET_COV field show?

Why is there a "K." prefix on some endpoints?

Why there are fewer endpoints going from R5 (N = 2,925) to R8 (N = 2,202)?

Should I include primary care registry (PRIM_OUT) codes in my cohort definitions?

I found BL_AGE after FU_END_AGE in the endpoint data, how is it possible?

Why do individuals who are not dead have death age in endpoint data?

I found EVENT_AGE after FU_END_AGE in endpoint data, how is it possible?

PreviousWhy is the case number dropping after the "Check pre-conditions, main-only, mode, ICD version" step?NextWhere do I find the most recent list of FinnGen endpoints?

Last updated 1 year ago

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