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FinnGen Handbook
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  • Introduction
  • Where to begin
  • Background Concepts
  • FinnGen Data Specifics
  • Working in the Sandbox
  • Working outside the Sandbox
  • Publishing FinnGen results
  • FAQ
    • FinnGen Spin Offs
    • FinnGen access and accounts
    • FinnGen data
      • What to do if I think I found a mistake in the data?
      • Where can I find a list of unrelated individuals in FinnGen?
      • When moving from BCOR to .txt files, what does the column called "correlation" mean?
      • How do I calculate time between events?
      • Can I select only the columns needed for my analysis to import into RStudio?
      • What is the difference is between LD-clumping and the Saige conditional analysis?
      • Can I download all pairwise LD data across the genome at once?
      • How to find latest data releases?
      • Why are there differences in the GWAS results between Data Freezes/Releases?
    • Citing FinnGen
    • Where can I find
    • PheWeb
    • Registries
    • Sandbox
    • Risteys
    • Endpoints
    • Pipelines
    • For biobanks
  • Release Notes
  • Tool Catalog
  • Glossary
  • User Support & Training
  • Data Protection & Security
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For the complete documentation index, see llms.txt. This page is also available as Markdown.
  1. FAQ

FinnGen data

Questions related to retrieval and contents of FinnGen data.

Questions in this section

What to do if I think I found a mistake in the longitudinal data?

What are the field/column names in FinnGen?

What covariates are used in FinnGen's core GWAS analyses?

Does FinnGen have lab results available?

Does FinnGen have family and relatedness information available?

Where can I find a list of unrelated individuals in FinnGen?

When moving from BCOR to .txt files, what does the column called "correlation" mean?

Is there really no participant birth year data?

How do I calculate time between events?

Can I select only the columns needed for my analysis to import into RStudio?

What is the difference between LD-clumping and the Saige conditional analysis?

Can I download all pairwise LD data across the genome at once?

How to find latest data releases?

Why are there differences in the GWAS results between Data Freezes/Releases?

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