Minimum phenotype data (before R11)

This page has been last updated for R11.

This data file was replaced by the minimum extended phenotype data file in Data Release 11.

Sandbox directory

The minimum phenotype data file is available as a separate file in the following Sandbox directory:

/finngen/library-red/finngen_R[RELEASE]/phenotype_1.0/

Data files

This data is available in the following file:

data/finngen_R{RELEASE]_minimum_1.0.txt.gz

The file contains the following columns:

Column	Description
FINNGENID	Sample ID
BL_YEAR	Year of DNA sample collection
BL_AGE	Age at DNA sample collection (years)
SEX	Gender (male/female/NA)
HEIGHT	Height (cm)
HEIGHT_AGE	Age at height measurement (years)
WEIGHT	Weight (kg)
WEIGHT_AGE	Age at weight measurement (years)
SMOKE2	Smoking status 2-categories (yes/no)
SMOKE3	Smoking status 3-categories (current/former/never)
SMOKE5	Smoking status 5-categories (current/occasional/quitter/former/never)
SMOKE_AGE	Age at the moment of the smoking survey (years)
regionofbirth	Regional councils numbers for region of birth according to Finnish Minister of the Interior (21-categories)
regionofbirthname	Name of the region of birth (21-categories) (1-Uusimaa 2- Varsinais-Suomi 4-Satakunta 5-Kanta Häme 6-Pirkanmaa 7-Päijät Häme 8-Kymenlaakso 9-South Karelia 10-Etelä Savo 11-Pohjois Savo 12-North Karelia 13-Central Finland 14-South Ostrobothnia 15-Ostrobothnia 16-Central Ostrobothnia 17-North Ostrobothnia 18-Kainuu 19-Lapland 20-Åland 200-Abroad 9999-Region ceded to Soviet)
moveabroad	If the person has moved abroad 3-categories (yes/no/NA)
NUMBER_OF_OFFSPRING	Number of biological children