Data Releases 2026

January 30th

We have released another version of Blood Cell Painting EA5 data to the Sandbox.

Blood Cell Painting (BCP) is a project where single cells from 390 healthy blood donors were imaged, single-cell features were extracted from the images, and genetic analyses were done for these features. Released are the features in raw, scaled to controls and batch corrected formats.

The data is further described in the readme provided and also in Handbook: https://docs.finngen.fi/finngen-data-specifics/red-library-data-individual-level-data/omics-data/high-content-cell-imaging

The data and documentation are available here:

• /finngen/library-red/EA5/cell_painting/BCP_EA5_2.0/

January 22nd

Please find an additional data file released to Sandbox for FinnGen 2 Expansion Area 5 (EA5) pilot. Specifically, this is an updated version of a compiled file to make analysis easier on the already released Metabolomic data.

A ready-to-use file connecting the raw data to FINNGENIDs (66/1000 samples do not have a FINNGENID) and sample timestamps is available here:

/finngen/library-red/EA5/metabolomics/final/EA5_Metabolomics_data.tsv /finngen/library-red/EA5/metabolomics/final/README_EA5_Metabolomics_data.tsv

and the metabolites annotation to chemical names and pathways can be found in:

/finngen/library-red/EA5/metabolomics/raw_data/HELS-01-21ML+DATA_TABLES.XLSX under the sheet "Chemical Annotation".

January 20th

Released a version of Kanta lab value regenie nulls in:

• /finngen/library-red/finngen_R13/kanta_lab_2.0/core_regenie_analysis_null_files/