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FinnGen Handbook
  • Introduction
  • Where to begin
  • Background Concepts
  • FinnGen Data Specifics
  • Disease Specific Task Forces
  • Working in the Sandbox
  • Working outside the Sandbox
  • FAQ
    • FinnGen Spin Offs
    • FinnGen access and accounts
    • FinnGen data
      • What to do if I think I found a mistake in the data?
      • What are the field/column names in FinnGen?
      • What covariates are used in FinnGen's core GWAS analyses?
      • Does FinnGen have lab results available?
      • Does FinnGen have family and relatedness information available?
      • Where can I find a list of unrelated individuals in FinnGen?
      • When moving from BCOR to .txt files, what does the column called "correlation" mean?
      • Is there really no participant birth year data?
      • How do I calculate time between events?
      • Can I select only the columns needed for my analysis to import into RStudio?
      • What is the difference is between LD-clumping and the Saige conditional analysis?
      • Can I download all pairwise LD data across the genome at once?
      • How to find latest data releases?
      • Why are there differences in the GWAS results between Data Freezes/Releases?
    • Where can I find
    • PheWeb
    • Registries
    • Sandbox
    • Risteys
    • Endpoints
    • Pipelines
    • Citing
    • For biobanks
    • Data Security and Protection
  • Release Notes
  • Tool Catalog
  • Glossary
  • User Support
  • Data Protection & Security
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  1. FAQ

FinnGen data

Questions related to retrieval and contents of FinnGen data.

Questions in this section

What to do if I think I found a mistake in the longitudinal data?

What are the field/column names in FinnGen?

What covariates are used in FinnGen's core GWAS analyses?

Does FinnGen have lab results available?

Does FinnGen have family and relatedness information available?

Where can I find a list of unrelated individuals in FinnGen?

When moving from BCOR to .txt files, what does the column called "correlation" mean?

Is there really no participant birth year data?

How do I calculate time between events?

Can I select only the columns needed for my analysis to import into RStudio?

What is the difference between LD-clumping and the Saige conditional analysis?

Can I download all pairwise LD data across the genome at once?

How to find latest data releases?

Why are there differences in the GWAS results between Data Freezes/Releases?

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Last updated 7 months ago

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