> For the complete documentation index, see [llms.txt](https://docs.finngen.fi/llms.txt). Markdown versions of documentation pages are available by appending `.md` to page URLs; this page is available as [Markdown](https://docs.finngen.fi/release-notes/data-releases-2022.md).
# Data Releases 2022
**15 December 2022**
* FinnGen EA3 AMD data (version 2.0)
* Version 2.0 of EA3 age-related macular degeneration (AMD) baseline and longitudinal files contains updated data from Tampere and Eastern Finland biobanks.
* The EA3 data usage is restricted to the [EA3 projects](/finngen-data-specifics/expansion-area-3-ea3-projects.md). See [AMD project documentation from the Members Area](https://www.finngen.fi/en/members/document/315).
* EA3 data is to be used only as stated in the respective EA3 study plan and need an accepted Analysis proposal as in all FinnGen studies.
* The data and documentation location in the Sandbox Red Library
* /finngen/library-red/EA3\_AMD\_2.0/
**7 December 2022**
* FinnGen R10 coding variant association results
* The data location in the Green Library:
* gs\://finngen-production-library-green/finngen\_R10/finngen\_R10\_analysis\_data/coding/
**7 December 2022**
* Updated EA3\_AMD\_1.0 data
* These updated EA3 age-related macular degeneration (AMD) files contain Visual acuity, Retinal thickness and anti-VEGF injection information in longitudinal format, and baseline information.
* The EA3 data usage is restricted to the [EA3 projects](/finngen-data-specifics/expansion-area-3-ea3-projects.md). See [AMD project documentation from the Members Area](https://www.finngen.fi/en/members/document/315).
* EA3 data is to be used only as stated in the respective EA3 study plan and need an accepted Analysis proposal as all FinnGen studies.
* The data and documentation location in the Sandbox Red Library
* /finngen/library-red/EA3\_AMD\_1.0/EA3\_AMD\_baseline\_readme\_1.0.txt
* /finngen/library-red/EA3\_AMD\_1.0/EA3\_AMD\_long\_readme\_1.0.txt
* /finngen/library-red/EA3\_AMD\_1.0/data/EA3\_AMD\_baseline\_1.0.txt
* /finngen/library-red/EA3\_AMD\_1.0/data/EA3\_AMD\_long\_1.0.txt
**1 December 2022**
* FinnGen R10 Regenie output files after step 1 (so-called nulls)
* These files are needed to run the conditional analysis in Sandbox without the need to rerun the method from scratch.
* The data and documentation location in Sandbox red library:
* /finngen/library-red/finngen\_R10/regenie\_nulls\_1.0/
* Detailed paths to library red data from catalog:
* /finngen/library-red/finngen\_R10/catalog/catalog.txt
**24 November 2022**
* FinnGen R10 annotated bgen files
* The data and documentation location in Sandbox red library:
* /finngen/library-red/finngen\_R10/bgen/data/annotated/
* Detailed paths to library red data from catalog:
* /finngen/library-red/finngen\_R10/catalog/catalog.txt
**24 November 2022**
* FinnGen R10 meta-analysis results released to the Green Library
* Data and documentation location in Google cloud:
* FinnGen + UKBB + EstBB meta-analysis:
* gs\://finngen-production-library-green/finngen\_R10/finngen\_R10\_analysis\_data/meta\_analysis/ukbb\_estbb/
* FinnGen + UKBB meta-analysis:
* gs\://finngen-production-library-green/finngen\_R10/finngen\_R10\_analysis\_data/meta\_analysis/ukbb/
* Meta-analysis browsers have been updated with the latest results:
*
*
**17 November 2022**
* FinnGen R10 parental endpoint data (version 1.0)
* These files contain parental endpoints that have been generated from cause of death register data.
* The data and documentation location in Sandbox red library:
* /finngen/library-red/finngen\_R10/parental\_endpoint\_1.0/
* Detailed paths to library red data from catalog:
* /finngen/library-red/finngen\_R10/catalog/catalog.txt\\
**16 November 2022**
* FinnGen R10 service sector data (version 2.0)
* Data is described in [Service Sector Data](/finngen-data-specifics/red-library-data-individual-level-data/what-phenotype-files-are-available-in-sandbox-1/service-sector-data.md).
* The data and documentation location in Sandbox red library:
* /finngen/library-red/finngen\_R10/service\_sector\_data\_2.0/
* Detailed paths to library red data from catalog:
* /finngen/library-red/finngen\_R10/catalog/catalog.txt
**15 November 2022**
* FinnGen R10 parental causes of death data (version 1.0)
* The data and documentation location in Sandbox red library:
* /finngen/library-red/finngen\_R10/parental\_causes\_of\_death\_1.0/
* Detailed paths to library red data from catalog:
* /finngen/library-red/finngen\_R10/catalog/catalog.txt
**15 November 2022**
* FinnGen EA3 Fatty liver disease (FLD) data (version 3.0)
* EA3 data is to be used only as stated in the respective EA3 study plan and need an accepted Analysis proposal as all FinnGen studies.
* The EA3 data usage is restricted to the [EA3 projects](/finngen-data-specifics/expansion-area-3-ea3-projects.md). See [FLD project documentation from Members Area](https://www.finngen.fi/fi/node/317).
* The data and documentation location in Sandbox red library:
* /finngen/library-red/EA3\_FLD\_3.0/
**14 November 2022**
* FinnGen R10 kinship data (version 2.0)
* The data and documentation location in Sandbox red library:
* /finngen/library-red/finngen\_R10/kinship\_2.0/
* Detailed paths to library red data from catalog:
* /finngen/library-red/finngen\_R10/catalog/catalog.txt
**11 November 2022**
* R10 heritabilities and genetic correlations released to the Green Library
* Sumstats after the munging step done by ldsc are added. These sumstats can be fed directly to `ldsc –rg` to calculate correlations.
* Data and documentation location in Google cloud:
* gs\://finngen-production-library-green/finngen\_R10/finngen\_R10\_analysis\_data/ldsc/
* Paths to sumstats in FinnGen green library are formed like
* data/munged/finngen\_\[RELEASE]\_\[PHENO].ldsc.sumstats.gz
**8 November 2022**
* FinnGen R10 imputed HLA allele genotypes
* The data and documentation location in Sandbox red library:
* /finngen/library-red/finngen\_R10/hla\_1.0/
* Detailed paths to library red data from catalog:
* /finngen/library-red/finngen\_R10/catalog/catalog.txt
**4 November 2022**
* Proteomics data (Olink and SomaLogic)
* The data contains the first 721 FinnGen individuals.
* Original data received as is and one with basic QC done as specified in the readme files.
* Readme files (readme.txt) are provided within each directory.
* Consult the providers (Olink/ SomaLogic) documentation in original\_data/ folder for details of the assays and data processing.
* The data and documentation location in Sandbox red library:
* SomaLogic: /finngen/library-red/EA5/proteomics/soma/first\_batch/
* Olink: FinnGen/library-red/EA5/proteomics/olink/first\_batch/
**2 November 2022**
* FinnGen R10 truncated endpoint file (version 1.0) released to Sandbox.
* This file is similar to the first events endpoint file released earlier, but with small adjustments:
* Follow-up date 31.12.2020 is used in the file. That date is the same date as the end of follow-up of death register.
* FU\_END\_AGEs of the individuals have been re-calculated using the updated follow-up end date.
* See [description of truncated endpoint data](/finngen-data-specifics/endpoints/complete-follow-up-time-of-the-finngen-registries-primary-endpoint-data/survival-analysis-using-the-truncated-endpoint-file-secondary-endpoint-data.md)
* The data and documentation location in Sandbox red library:
* /finngen/library-red/finngen\_R10/truncated\_endpoint\_file\_1.0/
* Detailed paths to library red data from catalog:
* /finngen/library-red/finngen\_R10/catalog/catalog.txt
**1 November 2022**
* FinnGen Release 10 GWAS, finemapping, conditional analysis, colocalization and autoreporting data released in the green library:
* This release contains new results for:
* Sex-specific association analysis results (under summary\_stats)
* Conditional analysis results
* GWAS data location:
* gs\://finngen-production-library-green/finngen\_R10/finngen\_R10\_analysis\_data/summary\_stats
* Fine-mapping data location:
* gs\://finngen-production-library-green/finngen\_R10/finngen\_R10\_analysis\_data/finemap
* Conditional analysis data location:
* gs\://finngen-production-library-green/finngen\_R10/finngen\_R10\_analysis\_data/conditional\_analysis
* Autoreporting data location:
* gs\://finngen-production-library-green/finngen\_R10/finngen\_R10\_analysis\_data/autoreporting
* Colocalization data location:
* gs\://finngen-production-library-green/finngen\_R10/finngen\_R10\_analysis\_data/colocalization
* Documentation location:
* gs\://finngen-production-library-green/finngen\_R10/finngen\_R10\_analysis\_documentation/
**1 November 2022**
* FinnGen 10 HLA allele analysis results released to the green library.
* Data location in the green library:
* gs\://finngen-production-library-green/finngen\_R10/finngen\_R10\_analysis\_data/hla/
* Documentation available at:
* gs\://finngen-production-library-green/finngen\_R10/finngen\_R10\_analysis\_documentation/finngen\_R10\_hla\_analysis.pdf
**27 October 2022**
* FinnGen R10 visual impairment register data (version 1.0) released to Sandbox.
* Data is described on [The Finnish Register of Visual Impairment](/finngen-data-specifics/red-library-data-individual-level-data/what-phenotype-files-are-available-in-sandbox-1/other-registers/the-finnish-register-of-visual-impairment.md) page.
* Data and documentation location in Sandbox red library
* /finngen/library-red/finngen\_R10/visual\_impairment\_register\_1.0/
* Detailed paths to library red data from catalog:
* /finngen/library-red/finngen\_R10/catalog/catalog.txt
**20 October 2022**
* FinnGen EA3 FLD data (version 2.0)
* The data contain laboratory and physiological measurements from the EA3 FLD cohort
* Data was delivered from Helsinki, Auria and Eastern Finland biobanks.
* Number of unique FINNGENID's: 55387
* Data and documentation location in Sandbox red library
* /finngen/library-red/EA3\_FLD\_2.0/
**12 October 2022**
* Finngen R10 cluster plot data
* Cluster plots location in the GREEN library in Google cloud:
* gs\://finngen-production-library-green/finngen\_R10/cluster\_plots/
* The cluster plot tsv files, that contain genotype intensities per variant for a subset of samples used in the cluster plots are released to the Sandbox at:
* /finngen/library-red/finngen\_R10/cluster\_plot\_1.0/data/
* Detailed paths of this data from the manifest file:
* /finngen/library-red/finngen\_R10/cluster\_plot\_1.0/manifest.txt
**11 October 2022**
* FinnGen R10 PRS data (version 1.0).
* Data and documentation location in Sandbox:
* /finngen/library-red/finngen\_R10/prs\_1.0/
* Detailed paths to library red data from catalog:
* /finngen/library-red/finngen\_R10/catalog/catalog.txt
**3 October 2022**
* FinnGen DF10 socioeconomic data released to the SES Sandbox.
* The socioeconomic data of FinnGen study subjects is available to a separate Sandbox environment (SES-Sandbox) and can be accessed only by researchers in Finland The registry data and accessing proses are described in the [How to apply SES sandbox access](/faq/about-finngen-access-and-accounts/how-to-apply-ses-sandbox-access.md) section.
* Path to the data is the SES-Sandbox:
* /finngen/pipelines/finngen\_R10/socio\_register\_1.0/
**3 October 2022**
* FinnGen R10 detailed version of Finnish cancer registry data (version 1.0)
* The data contains 90303 FinnGen participants.
* Data and documentation location in Sandbox:
* /finngen/library-red/finngen\_R10/cancer\_detailed\_1.0/
* Detailed paths to library red data from catalog:
* /finngen/library-red/finngen\_R10/catalog/catalog.txt
**3 October 2022**
* FinnGen R10 cancer screening data (version 1.0)
* The files contain data from Finnish nationwide breast and cervical cancer screening.
* The breast cancer screening file contains data of 143 233 FinnGen participants.
* The cervix cancer screening file contains data of 206 253 FinnGen participants.
* Data and documentation location in Sandbox:
* /finngen/library-red/finngen\_R10/cancer\_screening\_1.0/
* Detailed paths to library red data from catalog:
* /finngen/library-red/finngen\_R10/catalog/catalog.txt
**22 September 2022**
* FinnGen DF10 genotype data converted to plink format released to the Sandbox
* Data and documentation location in Sandbox:
* /finngen/library-red/finngen\_R10/genotype\_plink\_1.0/
* Detailed paths to library red data from catalog:
* /finngen/library-red/finngen\_R10/catalog/catalog.txt
**19 September 2022**
* FinnGen R10 infectious disease register corona data (version 1.0)
* The data contains 72350 (cumulative number) corona virus positive FinnGen participants.
* Data and documentation location in Sandbox:
* /finngen/library-red/finngen\_R10/infectious\_disease\_register\_corona\_1.0/
* Detailed paths to library red data from catalog:
* /finngen/library-red/finngen\_R10/catalog/catalog.txt
**19 September 2022**
* FinnGen R10 vaccination register data (version 1.0)
* The data contains vaccination data of 385 747 FinnGen participants.
* Data and documentation location in Sandbox:
* /finngen/library-red/finngen\_R10/vaccination\_register\_1.0/
* Detailed paths to library red data from catalog:
* /finngen/library-red/finngen\_R10/catalog/catalog.txt
**9 September 2022**
* FinnGen DF10 reproductive history data
* Description of the [reproductive history data](/finngen-data-specifics/red-library-data-individual-level-data/what-phenotype-files-are-available-in-sandbox-1/other-registers/reproductive-history-data.md)
* Data and documentation location in Sandbox:
* /finngen/library-red/finngen\_R10/birth\_and\_dvv\_register\_1.0/
* Detailed paths to library red data from catalog:
* /finngen/library-red/finngen\_R10/catalog/catalog.txt
**5 September 2022**
* FinnGen DF10 datasets released to Sandbox
* Relatedness analysis results
* /finngen/library-red/finngen\_R10/kinship\_1.0/
* PCA
* /finngen/library-red/finngen\_R10/pca\_1.0/
* Endpoints and covariates used in core DF10 analyses
* /finngen/library-red/finngen\_R10/analysis\_covariates/
* Bgen chunks for running GWAS in 40k variant chunks:
* /finngen/library-red/finngen\_R10/bgen/
* Detailed paths to library red data from catalog:
* /finngen/library-red/finngen\_R10/catalog/catalog.txt
**29 August 2022**
* FinnGen EA3 AMD data (version 1.0)
* These files contain diagnoses, procedures and structural form answers from AMD patients. Data was delivered to us from Helsinki biobank.
* Data and documentation location in Sandbox:
* /finngen/library-red/EA3\_AMD\_bcb\_1.0/
**29 August 2022**
* FinnGen DF10 chip data (version 1.0)
* Data and documentation location in Sandbox:
* /finngen/library-red/finngen\_R10/chipd\_1.0/data/
* Markdown of all genotype QC for both chip and imputation data /finngen/library-red/finngen\_R10/R10\_genotype\_qc.md
* Detailed paths to library red data from catalog:
* /finngen/library-red/finngen\_R10/catalog/catalog.txt
**24 August 2022**
* FinnGen DF10 service sector data (version 1.0)
* See the description of [service sector data](/finngen-data-specifics/red-library-data-individual-level-data/what-phenotype-files-are-available-in-sandbox-1/service-sector-data.md).
* Data and documentation location in Sandbox:
* /finngen/library-red/finngen\_R10/service\_sector\_data\_1.0/
* Detailed paths to library red data from catalog:
* /finngen/library-red/finngen\_R10/catalog/catalog.txt
**23 August 2022**
* Please find DF10 Register of Congenital Malformations data (version 1.0)
* [The Register of Congenital Malformations](/finngen-data-specifics/red-library-data-individual-level-data/what-phenotype-files-are-available-in-sandbox-1/other-registers/the-register-of-congenital-malformations.md) is described in the FinnGen Analyst Handbook.
* Data and documentation location in Sandbox:
* /finngen/library-red/finngen\_R10/malformation\_register\_1.0
* Detailed paths to library red data from catalog:
* /finngen/library-red/finngen\_R10/catalog/catalog.txt
**15 August 2022**
* FinnGen release 10 genotype and phenotype data
* Finngen R10 data was imputed using SISuV4.2 reference panel that contains 8,554 high coverage \[25x] WGS Finnish individuals.
* The current data statistics are:
* Number of individuals with genotypes = 430 897
* Number of individuals with endpoints = 429 209
* Number of imputed variants = 21 311 942
* Number of endpoints = 4 519
* Data and documentation location in Sandbox:
* Genotypes in VCF format & Documentation:
* /finngen/library-red/finngen\_R10/genotype\_1.0/
* Phenotypes & Documentation:
* /finngen/library-red/finngen\_R10/phenotype\_1.0/
* Detailed paths to library red data from catalog:
* /finngen/library-red/finngen\_R10/catalog/catalog.txt
**30 June 2022**
* [VNR code](/finngen-data-specifics/finnish-health-registers-and-medical-coding/more-information-on-health-code-sets.md) mappings released to the Sandbox. For example, dosage and strength of drugs are mapped and available in the Sandbox and FinnGen library green.
* Data and documentation location in Sandbox:
* /finngen/library-green/finngen\_R6/finngen\_R6\_medical\_codes/fgVNR.tsv
* /finngen/library-green/finngen\_R6/finngen\_R6\_medical\_codes/fgVNR\_readme.txt
* /finngen/library-green/finngen\_R6/finngen\_R6\_medical\_codes/fgVNR\_table\_definition.tsv
* Data and documentation location in Google cloud:
* gs\://finngen-production-library-green/finngen\_R6/finngen\_R6\_medical\_codes
**28 June 2022**
* FinnGen R9 service\_sector\_data\_all\_registers (version 1.0)
* Data and documentation location in Sandbox:
* /finngen/library-red/finngen\_R9/service\_sector\_data\_all\_registers\_1.0/
* Detailed paths to library red data from catalog:
* /finngen/library-red/finngen\_R9/catalog/catalog.txt
**21 June 2022**
* FinnGen R9 HLA analysis results.
* Analysis results location in Google cloud:
* gs\://finngen-production-library-green/finngen\_R9/finngen\_R9\_analysis\_data/hla/
* Analysis results location in Sandbox:
* /finngen/library-green/finngen\_R9/finngen\_R9\_analysis\_data/hla/
* The analysis readme location in Google cloud:
* gs\://finngen-production-library-green/finngen\_R9/finngen\_R9\_analysis\_documentation/finngen\_R9\_hla\_analysis.md
* gs\://finngen-production-library-green/finngen\_R9/finngen\_R9\_analysis\_documentation/finngen\_R9\_hla\_analysis.pdf
* The analysis readme location in Sandbox:
* /finngen/library-green/finngen\_R9/finngen\_R9\_analysis\_documentation/finngen\_R9\_hla\_analysis.md
* /finngen/library-green/finngen\_R9/finngen\_R9\_analysis\_documentation/finngen\_R9\_hla\_analysis.pdf
**10 June 2022**
* FinnGen R9 infectious disease register corona data (version 2.0)
* This data contains 57333 (cumulative number) corona virus positive FinnGen participants. After these 50 000 new cases over the last 6 months, almost 15 % of Finngen participants have now been tested positive for corona.
* Data and documentation location in Sandbox:
* /finngen/library-red/finngen\_R9/infectious\_disease\_register\_corona\_2.0/
* Detailed paths to library red data from catalog:
* /finngen/library-red/finngen\_R9/catalog/catalog.txt
**31 May 2022**
* FinnGen R9 PRS data (version 1.0) released to Sandbox.
* Data and documentation location in Sandbox:
* /finngen/library-red/finngen\_R9/prs\_1.0/
* Detailed paths to library red data from catalog:
* /finngen/library-red/finngen\_R9/catalog/catalog.txt
**16 May 2022**
* FinnGen R9 parental causes of death (version 1.0) released to Sandbox.
* The data is described in [Other registry data files in Sandbox](/finngen-data-specifics/red-library-data-individual-level-data/what-phenotype-files-are-available-in-sandbox-1/other-registers.md).
* Data and documentation location in Sandbox:
* /finngen/library-red/finngen\_R9/parental\_causes\_of\_death\_1.0/
* Detailed paths to library red data from catalog:
* /finngen/library-red/finngen\_R9/catalog/catalog.txt
**13 May 2022**
* Results from FinnGen release 9 meta-analyses with UKBB and EstBB
* Data and documentation location in Google cloud:
* gs\://finngen-production-library-green/finngen\_R9/finngen\_R9\_analysis\_data/ukbb\_meta/
* gs\://finngen-production-library-green/finngen\_R9/finngen\_R9\_analysis\_data/ukbb\_estbb\_meta/
* Data and documentation location in Sandbox:
* /finngen/library-green/finngen\_R9/finngen\_R9\_analysis\_data/ukbb\_meta/
* /finngen/library-green/finngen\_R9/finngen\_R9\_analysis\_data/ukbb\_estbb\_meta/
**2 May 2022**
* FinnGen R9 visual impairment register data (version 1.0)
* The data is described in section [Other registry data files in Sandbox](/finngen-data-specifics/red-library-data-individual-level-data/what-phenotype-files-are-available-in-sandbox-1/other-registers.md).
* Data and documentation location in Sandbox: /finngen/library-red/finngen\_R9/visual\_impairment\_register\_1.0/
* Detailed paths to library red data from catalog:\
/finngen/library-red/finngen\_R9/catalog/catalog.txt
**26 April 2022**
* FinnGen R9 kidney disease register data (version 1.0)
* The data is described in [Other registry data files in Sandbox](/finngen-data-specifics/red-library-data-individual-level-data/what-phenotype-files-are-available-in-sandbox-1/other-registers.md)
* Data and documentation location in Sandbox: /finngen/library-red/finngen\_R9/kidney\_disease\_register\_1.0/
* Detailed paths to library red data from catalog:\
/finngen/library-red/finngen\_R9/catalog/catalog.txt
**14 April 2022**
* R9 coding variant analysis results have been released in green library.
* Data location in Google cloud: gs\://finngen-production-library-green/finngen\_R9/finngen\_R9\_analysis\_data/coding/full
* Documentation location in Google cloud: gs\://finngen-production-library-green/finngen\_R9/finngen\_R9\_analysis\_data/coding/R9\_coding\_variant\_results\_full.README
* Data location in Sandbox: /finngen/library-green/finngen\_R9/finngen\_R9\_analysis\_data/coding/full
* Documentation location in Sandbox: /finngen/library-green/finngen\_R9/finngen\_R9\_analysis\_data/coding/R9\_coding\_variant\_results\_full.README
**13 April 2022**
* R9 GWAS, finemapping, colocalization and autoreporting data in green library.
* Notable changes:
* GWAS analysis performed for 2272 endpoints, including 3 quantitative
* Maximum region changed from 6 MB to 10 MB in finemapping
* Data location in Google cloud:
* GWAS: gs\://finngen-production-library-green/finngen\_R9/finngen\_R9\_analysis\_data/summary\_stats
* fine-mapping: gs\://finngen-production-library-green/finngen\_R9/finngen\_R9\_analysis\_data/finemap
* autoreporting: gs\://finngen-production-library-green/finngen\_R9/finngen\_R9\_analysis\_data/autoreporting
* colocalization: gs\://finngen-production-library-green/finngen\_R9/finngen\_R9\_analysis\_data/colocalization
* The documentation is available at: gs\://finngen-production-library-green/finngen\_R9/finngen\_R9\_analysis\_documentation/
* Data location in Sandbox:
* GWAS: /finngen/library-green/finngen\_R9/finngen\_R9\_analysis\_data/summary\_stats
* fine-mapping: /finngen/library-green/finngen\_R9/finngen\_R9\_analysis\_data/finemap
* autoreporting: /finngen/library-green/finngen\_R9/finngen\_R9\_analysis\_data/autoreporting
* colocalization: /finngen/library-green/finngen\_R9/finngen\_R9\_analysis\_data/colocalization
* The documentation is available at: /finngen/library-green/finngen\_R9/finngen\_R9\_analysis\_documentation/
**13 April 2022**
* R8 susie finemapping version 2.0 data in green library.
* Changes:
* Susie version 0.11.92 used
* individual Bayes factors for each variant added to data
* This data does not include FINEMAP finemapping, since that has not changed since 1.0.
* The new susie data is available at: gs\://finngen-production-library-green/finngen\_R8/finngen\_R8\_analysis\_data/finemap\_2.0
* Documentation, including file descriptions, is available at :
* Data location in Google cloud: gs\://finngen-production-library-green/finngen\_R8/finngen\_R8\_analysis\_documentation/readme\_r8\_finemap\_2.0.md
* Data location in Sandbox: /finngen/library-green/finngen\_R8/finngen\_R8\_analysis\_documentation/readme\_r8\_finemap\_2.0.md
**11 April 2022**
* FinnGen R9 service sector data (version 1.0)
* Data includes information from 392 374 FinnGen participants about
* Service sectors and specialties of the Hilmo inpatient and outpatient register data
* Service sector, contact type and profession of the primary care data
* Reimbursement cost information of the kela drug register purchase data
* Data is described in [Other registry data files in Sandbox](/finngen-data-specifics/red-library-data-individual-level-data/what-phenotype-files-are-available-in-sandbox-1/other-registers.md)
* Data and documentation location in Sandbox:
* /finngen/library-red/finngen\_R9/service\_sector\_data\_1.0/
* Detailed paths to library red data from catalog:
* /finngen/library-red/finngen\_R9/catalog/catalog.txt
**1 April 2022**
* FinnGen R9 truncated endpoint file (version 1.0)
* Truncated endpoint file is similar to the first events endpoint file released earlier, but with small adjustments.
* All registers have a common follow-up date 31.12.2019 in this file.
* The FU\_END\_AGEs of the individuals have been re-calculated using the common follow-up end date.
* More information about the [truncated endpoint file.](/finngen-data-specifics/endpoints/complete-follow-up-time-of-the-finngen-registries-primary-endpoint-data/survival-analysis-using-the-truncated-endpoint-file-secondary-endpoint-data.md)
* Data and documentation location in Sandbox:
* /finngen/library-red/finngen\_R9/truncated\_endpoint\_file\_1.0/
* Detailed paths to library red data from catalog:
* /finngen/library-red/finngen\_R9/catalog/catalog.txt
**31 March 2022**
* FinnGen R9 cancer datasets
* cancer\_screening\_1.0
* This includes Finnish nationwide breast and cervical cancer screening data.
* cancer\_detailed\_1.0
* This is the detailed version of Finnish cancer registry data.
* Data and documentation location in Sandbox:
* /finngen/library-red/finngen\_R9/cancer\_screening\_1.0/
* /finngen/library-red/finngen\_R9/cancer\_detailed\_1.0/
* Detailed paths to library red data from catalog:
* /finngen/library-red/finngen\_R9/catalog/catalog.txt
**17 March 2022**
* FinnGen R9 infectious disease register corona data (version 1.0)
* The data consists of 7329 (cumulative number) corona virus positive FinnGen participants until 31st December 2021.
* This release has been processed from the same raw data as the previous R8\_3.0, but filtered with R9 genotype list.
* Data and documentation location in Sandbox:
* /finngen/library-red/finngen\_R9/infectious\_disease\_register\_corona\_1.0/
* Detailed paths to library red data from catalog:
* /finngen/library-red/finngen\_R9/catalog/catalog.txt
**16 March 2022**
* FinnGen R9 vaccination register data (version 1.0)
* Vaccination data of 348 982 FinnGen participants
* Data and documentation location in Sandbox:
* /finngen/library-red/finngen\_R9/vaccination\_register\_1.0/
* Detailed paths to library red data from catalog:
* /finngen/library-red/finngen\_R9/catalog/catalog.txt
**16 March 2022**
* FinnGen R9 birth and dvv register data (version 1.0)
* The data combines information from population register (DVV) (since 1953) and medical birth register (since 1987).
* Data from 167 920 FinnGen mother participants, and 63 742 child participants.
* Reproductive history data is described in FinnGen Analyst Handbook section [Other registry data files in Sandbox](/finngen-data-specifics/red-library-data-individual-level-data/what-phenotype-files-are-available-in-sandbox-1/other-registers.md)
* Data and documentation location in Sandbox:
* /finngen/library-red/finngen\_R9/birth\_and\_dvv\_register\_1.0/
* Detailed paths to library red data from catalog:
* /finngen/library-red/finngen\_R9/catalog/catalog.txt
**10 March 2022**
* Finngen R9 cluster plot data files
* contain genotype intensities per variant for a subset of samples that are used in cluster plots (released in the green library).
* Data and documentation location in Sandbox:
* /finngen/library-red/finngen\_R9/cluster\_plot\_1.0/
* Detailed paths to library red data from manifest:
* /finngen/library-red/finngen\_R9/cluster\_plot\_1.0/manifest.txt
**3 March 2022 (edit: Aug 2024 - meta-analysis results with Estonian biobank are no longer available)**
* FinnGen release 8, UKBB, and Estonia Biobank meta-analysis results have been updated with 48 new meta-analysed endpoints (total 98 meta-analysed endpoints)
* The results include summary statistics from meta-analysis (including leave-one-out results) and autoreporting results.
* Data in green library:
* Data location in Google cloud: gs\://finngen-production-library-green/finngen\_R8/finngen\_R8\_analysis\_data/ukbb\_estbb\_meta/
* Data location in Sabox:/finngen/library-green/finngen\_R8/finngen\_R8\_analysis\_data/ukbb\_estbb\_meta/
* Documentation in green library:
* Data location in Google cloud: gs\://finngen-production-library-green/finngen\_R8/finngen\_R8\_analysis\_data/ukbb\_estbb\_meta/
* Data location in Sabox: /finngen/library-green/finngen\_R8/finngen\_R8\_analysis\_data/ukbb\_estbb\_meta/
* The Pheweb instance running with these results is updated and can be found at .
**18 February 2022**
* FinnGen R9 malformation register data (version 1.0)
* The Register of Congenital Malformations contains national-level data on congenital chromosomal and structural anomalies, as well as a few other congenital anomalies like congenital hypothyroidism and teratomas, detected or suspected in stillborn and live born infants and foetuses.
* FinnGen data consist malformation register data from 7527 FinnGen mother participants and 1992 FinnGen child participants.
* Data is described in section [Other registry data files](/finngen-data-specifics/red-library-data-individual-level-data/what-phenotype-files-are-available-in-sandbox-1/other-registers.md).
* Data and documentation location in Sandbox:
* /finngen/library-red/finngen\_R9/malformation\_register\_1.0/
* Detailed paths to library red data from catalog:
* /finngen/library-red/finngen\_R9/catalog/catalog.txt
**15 February 2022**
* FinnGen R9 chip data (version 1.0)
* Data and documentation location in Sandbox:
* /finngen/library-red/finngen\_R9/chipd\_1.0/
**2 February 2022**
* FinnGen release 9 genotype and phenotype data
* Finngen R9 data was imputed using SISuV4 reference panel that contains 8,554 high coverage \[25x] WGS Finnish individuals.
* The current data statistics are:
* Number of individuals with genotypes = 392 649
* Number of individuals with endpoints = 392 423
* Number of imputed variants = 20 175 454
* Number of endpoints = 4 526
* Data and documentation location in Sandbox:
* Genotypes in VCF format & Documentation:
* /finngen/library-red/finngen\_R9/genotype\_1.0/
* Genotypes in PLINK format and Documentation:
* /finngen/library-red/finngen\_R9/genotype\_plink\_1.0
* Phenotypes & Documentation:
* /finngen/library-red/finngen\_R9/phenotype\_1.0/
* PCA/kinship results and analysis covariates:
* /finngen/library-red/finngen\_R9/kinship\_1.0/
* /finngen/library-red/finngen\_R9/pca\_1.0/
* /finngen/library-red/finngen\_R9/prune\_1.0/
* /finngen/library-red/finngen\_R9/analysis\_covariates/
* Detailed paths to library red data from catalog:
* /finngen/library-red/finngen\_R9/catalog/catalog.txt